Course theme

Type of course

Banner
Banner

Exploration of sulfur-cycling microorganisms from anoxic Black Sea waters and sediment

  • 8 September, 2021
  • 13:30
  • Wageningen University, Microbiology
  • prof.dr AJM Stams
  • dr I Sanchez Andrea

Important biogeochemical processes take place in anoxic marine waters and sediments. Sulfur-cycling microorganisms such as sulfur-oxidizing and sulfate-reducing bacteria (SOB, SRB) play a key role. However, their microbial and metabolic diversity has not been mapped out. Furthermore, other sulfur-cycling microorganisms such as anaerobic sulfated polysaccharide degraders have remained completely out of sight. This thesis is an exploration of sulfur-cycling microorganisms in the Black Sea, a model ecosystem and the world’s largest anoxic marine basin. Genome-resolved metagenomics yielded an improved view on the diversity of putative SOB and SRB in the anoxic water column and hypotheses on their metabolic capacities. Further, a novel SRB and two novel anaerobic sulfated polysaccharide-degrading bacteria were isolated through anaerobic cultivation. A genome-based characterization revealed several interesting metabolic aspects, such as manganese reduction and exopolysaccharide formation. Finally, the mechanism of sulfated polysaccharide degradation was studied in depth by transcriptomics, indicating a novel L-fucose degradation pathway.

Shape
Researcher

Daan van Vliet

readmore
shape Banner
We provide a disciplinary and multidisciplinary research programme aimed at advanced understanding of environmental problems and advanced training of PhD candidates in this field.
More information
shape Banner
Here you will find a selection of international events related to the socio-economic and natural sciences of the environment.
View our events